GC/MS Data Visualisation

/

Raw unit-resolution GC/MS data are not suitable for 3D printing without preliminary data processing, as neighboring extracted ion chromatograms merge into a single structure. To address this issue, an R script was developed.

A series of test prints were performed to determine the optimal profile for mass spectral peaks, as well as the ideal width for chromatographic peaks. Some of these models are shown in Fig. 1.

A fragment of GC/MS data containing five closely eluting compounds was 3D printed using various scaling strategies and used as tangible models in mass spectrometry classes. A large-scale model (158.7×344.8×120.0 mm), assembled from two fragments made the most favorable impression and generated the most interest among students (Fig. 2).


A series of test prints

Fig. 1. A series of test prints conducted to determine the optimal profile for mass spectral peaks, as well as the ideal width for chromatographic peaks.



3D printed fragment of GC/MS data

Fig. 2. 3D printed fragment of GC/MS data (158.7×344.8×120.0 mm).


 

Project files

The R script is distributed under the MIT license.
The STL files are distributed under the CC BY‑SA 4.0 license.